AWS Root user has unrestricted access in the account. This user should only be used for those activities that require Root level access, like Billing or adding other AWS accounts to Organisations. For day-to-day activities in the account, users with required permissions must be created.
Having an access key for the Root user becomes a liability and poses the additional risk of being misused or stolen. If an attacker gains access to the root user access keys, they could take over the entire AWS account compromising every single piece of data, access to virtual machines or even the entire operations of the Organisation.
Following is the step-by-step guide to remove access keys for a Root User on AWS:
Sign in to the AWS management console using the account root user credentials
Click on the account name or number in the upper right corner and select Security Credentials from the drop down
Select the Access Keys section
To delete the access key, select the radio button
From the Actions dropdown, select Delete
This will display a pop up. Click on Deactivate
Provide the Access Key ID
Click on Delete to remove the access key